Stem-loop pma-mir-10a

Accession

MI0017010

Description

Petromyzon marinus pma-mir-10a precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

uaaggguggccgauguaUACCCUGUGGACUCGAAUUUGUgcuggcuucuggaauccacaaauucgauucuuaaggacuacauagucaccuccu
...(((((((..(((((...(((..(((.(((((((((((((((...))))....))))))))))).)))..)))..))))).)))))))...

Structure

uaa       cg     UAC   GU   C           ----    c 
   ggguggc  augua   CCU  GGA UCGAAUUUGUg    cugg  
   |||||||  |||||   |||  ||| |||||||||||    |||| u
   uccacug  uacau   gga  ucu agcuuaaacac    gguc  
ucc       -a     -ca   au   u           cuaa    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-10a

• Accession: MIMAT0019378
• Description: Petromyzon marinus pma-miR-10a mature miRNA
• Sequence: 18 - UACCCUGUGGACUCGAAUUUGU - 39
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383