Stem-loop dme-mir-4943

Accession

MI0017729

Description

Drosophila melanogaster dme-mir-4943 precursor miRNA

Sequence

69 reads, 12 reads per million, 13 experiments

uucggaucguuugaaugaccaauuuugucUUUUAUUUUCUCUGUGUUUUCAguuaaugaaagauagUGAACACAGUGCUAAAUGAAAGAuaaugagacccagucgacaggacccaag
...((.((.(((((.((.......(((((((((((((.(.((((((((...(((.......)))...)))))))).)..))))))))))))).......)).)))).).)).))...

Structure

uuc  a  g -    a  accaauu             -U U        UCA   aa 
   gg uc u uuga ug       uugucUUUUAUUU  C CUGUGUUU   guu  u
   || || | |||| ||       |||||||||||||  | ||||||||   |||  g
   cc ag a agcu ac       aauAGAAAGUAAA  G GACACAAG   uag  a
gaa  c  g c    g  ccagagu             UC U        Uga   aa 

Annotation confidence Not enough data

Genome context

chr2L: 16528375-16528491 [-]

Mature dme-miR-4943-5p

• Accession: MIMAT0020151
• Description: Drosophila melanogaster dme-miR-4943-5p mature miRNA
• Sequence: 30 - UUUUAUUUUCUCUGUGUUUUCA - 51
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4943-3p

• Accession: MIMAT0020152
• Description: Drosophila melanogaster dme-miR-4943-3p mature miRNA
• Sequence: 67 - UGAACACAGUGCUAAAUGAAAGA - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215