Stem-loop dme-mir-4958

Accession

MI0017744

Description

Drosophila melanogaster dme-mir-4958 precursor miRNA

Sequence

51 reads, 2 reads per million, 20 experiments

ucucuggcagcugcaguuccguuuccggagcGGGAUCUGGAACGGGCUCUGGUucuagaucaggauccaaucaugcacccggucCAGGUACCGCUCCAGGUCCCGUucccggaaacggugccaccgccaaugca
....((((.(..(((...(((((((((((((((((((((((.(((..(((((........((.(((...))).))........)))))..))).))))))))))))).)))))))))))))..).)))).....

Structure

-ucuc    a cu   guu          -             A   GC     Uucuagau  g   c 
     uggc g  gca   ccguuuccgg agcGGGAUCUGGA CGG  UCUGG        ca gau  
     |||| |  |||   |||||||||| ||||||||||||| |||  |||||        || ||| c
     accg c  cgu   ggcaaaggcc uUGCCCUGGACCU GCC  GGACc        gu cua  
acgua    c ac   ---          c             C   AU     uggcccac  a   a 

Annotation confidence Not enough data

Genome context

chrX: 16080923-16081056 [-]

Mature dme-miR-4958-5p

• Accession: MIMAT0020177
• Description: Drosophila melanogaster dme-miR-4958-5p mature miRNA
• Sequence: 32 - GGGAUCUGGAACGGGCUCUGGU - 53
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4958-3p

• Accession: MIMAT0020178
• Description: Drosophila melanogaster dme-miR-4958-3p mature miRNA
• Sequence: 85 - CAGGUACCGCUCCAGGUCCCGU - 106
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215