Stem-loop dme-mir-4987

Accession

MI0017773

Description

Drosophila melanogaster dme-mir-4987 precursor miRNA

Sequence

32 reads, 27 reads per million, 18 experiments

gcggugccguugaugaugacacagcgcgcUUGCAACAGCGUGCGGCACGAUUcucacagcagggcuccagcucggccaaaaaaUCGGUCGUCGCCAUUGCAAGCucaccguuuggucucaccacggccaaga
((((((.(((((.((....))))))).((((((((..(((.(((((.(((((......((.((((....)))).)).....)))))))))))))..)))))))).))))))((((((.......))))))..

Structure

---------------------      ccguugaugaugacacagcgc        CA   U     A     cucaca  a    u 
                     gcggug                     gcUUGCAA  GCG GCGGC CGAUU      gc gggc c
                     ||||||                     ||||||||  ||| ||||| |||||      || ||||  
                     ugccac                     CGAACGUU  CGC UGCUG GCUaa      cg cucg c
agaaccggcaccacucugguu      --------------------u        AC   -     -     -aaaac  g    a 

Annotation confidence Not enough data

Genome context

chr2L: 10840345-10840476 [-]

Mature dme-miR-4987-5p

• Accession: MIMAT0020225
• Description: Drosophila melanogaster dme-miR-4987-5p mature miRNA
• Sequence: 30 - UUGCAACAGCGUGCGGCACGAUU - 52
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4987-3p

• Accession: MIMAT0020226
• Description: Drosophila melanogaster dme-miR-4987-3p mature miRNA
• Sequence: 84 - UCGGUCGUCGCCAUUGCAAGC - 104
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215