Stem-loop gma-MIR4992

Accession

MI0017858

Description

Glycine max gma-MIR4992 precursor miRNA

Literature search

1 open access papers mention gma-MIR4992
(1 sentences)

Sequence

10000 reads, 27.0 reads per million, 164 experiments

AGAUGAUCUCGACCCAAUAACCGUguuagaauguacgauauuuuaagauggucucagcgaccgucuuaaaauaauguacAUUCUAAGAUGGUUUUUGUUAGaaucgucuu
(((((((.((....(((.((((((.((((((((((((.(((((((((((((((.....))))))))))))))).)))))))))))).)))))).)))...))))))))).

Structure

-       C  GACC   U      g            a               u 
 AGAUGAU UC    CAA AACCGU uuagaauguacg uauuuuaagaugguc c
 ||||||| ||    ||| |||||| |||||||||||| ||||||||||||||| a
 ucugcua aG    GUU UUGGUA AAUCUUAcaugu auaaaauucugccag g
u       -  -AUU   U      G            a               c 

Annotation confidence Low

Genome context

chr5: 9413832-9413941 [-]

Mature gma-miR4992-5p

• Accession: MIMAT0054197
• Description: Glycine max gma-miR4992-5p mature miRNA
• Sequence: 1 - AGAUGAUCUCGACCCAAUAACCGU - 24
• Evidence: experimental ; unknown

Mature gma-miR4992-3p

• Accession: MIMAT0021010
• Description: Glycine max gma-miR4992-3p mature miRNA
• Sequence: 80 - AUUCUAAGAUGGUUUUUGUUAG - 101
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506