Stem-loop ssc-mir-2320

Accession

MI0017997

Description

Sus scrofa ssc-mir-2320 precursor miRNA

Literature search

5 open access papers mention ssc-mir-2320
(15 sentences)

Sequence

73 reads, 49 reads per million, 11 experiments

gcuguccccaUGGCACAGGGUCCAGCUGUCGGcuguaauacccgauggguCGAUGAUGGUCCCUGUGUUUGgggcgagcac
(((..(((((.(((((((((.(((..((((((((.............)))))))).))).))))))))))))))..)))..

Structure

--   gu     U         U   GC        guaau 
  gcu  cccca GGCACAGGG CCA  UGUCGGcu     a
  |||  ||||| ||||||||| |||  ||||||||     c
  cga  gggGU UUGUGUCCC GGU  GUAGCugg     c
ca   gc     -         U   -A        guagc 

Annotation confidence Not enough data

Genome context

chr6: 60147823-60147903 [-]

Mature ssc-miR-2320-5p

• Accession: MIMAT0020597
• Description: Sus scrofa ssc-miR-2320-5p mature miRNA
• Sequence: 11 - UGGCACAGGGUCCAGCUGUCGG - 32
• Evidence: experimental ; Illumina [1-3]

Mature ssc-miR-2320-3p

• Accession: MIMAT0020598
• Description: Sus scrofa ssc-miR-2320-3p mature miRNA
• Sequence: 51 - CGAUGAUGGUCCCUGUGUUUG - 71
• Evidence: experimental ; Illumina [1-3]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328


2. PubMed ID: 22953717
   Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
   Podolska A, Anthon C, Bak M, Tommerup N, Skovgaard K, Heegaard PM, Gorodkin J, Cirera S, Fredholm M
   BMC Genomics (2012) 13:459


3. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100