Stem-loop osa-MIR5148c

Accession

MI0018063

Description

Oryza sativa osa-MIR5148c precursor miRNA

Sequence

56 reads, 47 reads per million, 2 experiments

cacgauaugacguuuguaccccucacaaguacaaguauaaugcaugucaaUGAGGGGUAGAAAUGUCAUAUCAUgugug
(((((((((((((((.(((((((((...(.(((.(((...))).))))..))))))))).))))))))))))..)))..

Structure

--   --            g         caa u   a   u 
  cac  gauaugacguuu uaccccuca   g aca gua  
  |||  |||||||||||| |||||||||   | ||| ||| a
  gug  CUAUACUGUAAA AUGGGGAGU   c ugu cgu  
gu   UA            G         -aa -   a   a 

Annotation confidence Not enough data

Genome context

Chr11: 2813203-2813281 [-]

Mature osa-miR5148c

• Accession: MIMAT0021096
• Description: Oryza sativa osa-miR5148c mature miRNA
• Sequence: 51 - UGAGGGGUAGAAAUGUCAUAUCAU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21525786
   Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus
   "Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D"
   "RNA Biol (2011) 8:538-547