Stem-loop mtr-MIR5205d

Accession

MI0018243

Description

Medicago truncatula mtr-MIR5205d precursor miRNA

Literature search

1 open access papers mention mtr-MIR5205d
(1 sentences)

Sequence

26594 reads, 194.0 reads per million, 111 experiments

aaaggguCUUAUAAUUAGGGACGGAGGUAGUaauauauacucucuccgucccuUUUUAUAGGAGUAGUUUAC
....(.((((((((..(((((((((((.((((.....)))).)))))))))))..)))))))).).......

Structure

---aaag g        UU           U    a 
       g uCUUAUAA  AGGGACGGAGG AGUa u
       | ||||||||  ||||||||||| |||| a
       U AGGAUAUU  ucccugccucu ucau u
CAUUUGA G        UU           c    a 

Annotation confidence Low

Genome context

chr4: 45033879-45033950 [+]

Mature mtr-miR5205d-5p

• Accession: MIMAT0021136
• Description: Medicago truncatula mtr-miR5205d-5p mature miRNA
• Sequence: 8 - CUUAUAAUUAGGGACGGAGGUAGU - 31
• Evidence: experimental ; Illumina [1]

Mature mtr-miR5205d-3p

• Accession: MIMAT0055024
• Description: Medicago truncatula mtr-miR5205d-3p mature miRNA
• Sequence: 54 - UUUUAUAGGAGUAGUUUAC - 72
• Evidence: experimental ; unknown

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010