Stem-loop mtr-MIR5209

Accession

MI0018249

Description

Medicago truncatula mtr-MIR5209 precursor miRNA

Sequence

uggaauuCGAGGAGGCGGUAUUGUUUGAAccagguuuugugcgagcaaagaaggaaguaaugcuccauaagucauugguaugggaucaaacuguugucuuugauucugcugauug
.(((((.((((((.(((((.((((((.((((((..((((((.(((((.............)))))))))))...))))).).))).))))))))..)))))))))))........

Structure

-------u     u      -G     A   -   G -     -gu      c     aagaa 
        ggaau CGAGGA  GCGGU UUG UUU A Accag   uuugug gagca     g
        ||||| ||||||  ||||| ||| ||| | |||||   |||||| |||||     g
        ucuua guuucu  uguca aac agg u ugguu   gaauac cucgu     a
guuagucg     -      gu     -   u   g a     acu      -     aauga 

Annotation confidence Not enough data

Genome context

chr7: 17957448-17957562 [+]

Mature mtr-miR5209

• Accession: MIMAT0021142
• Description: Medicago truncatula mtr-miR5209 mature miRNA
• Sequence: 8 - CGAGGAGGCGGUAUUGUUUGAA - 29
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010