Stem-loop mtr-MIR5216a

Accession

MI0018279

Description

Medicago truncatula mtr-MIR5216a precursor miRNA

Sequence

agugacaguugccguugcuugagucaaaguaauaccgauagaggccaaguucgccccaggaaucgggccacuguuagcaguaccagaagugccugcugccguaUUAGGAGUGAAAAACGGUGGAAguccaua
.(.(((..((((((((((((......))))......(((((.((((..((((.......))))..)))).)))))((((((((.....))).))))).((......)).......))))))))..))))...

Structure

--a u   ag        gcuugagucaaaguaauaccgauagaggccaaguucgccccaggaaucgggccacuguuagcaguaccagaagugccugcug  gu 
   g gac  uugccguu                                                                                  cc  a
   | |||  ||||||||                                                                                  ||   
   c cug  GGUGGCAA                                                                                  GG  U
aua -   AA        ---------------------------------------------------------------------------AAAGUGA  AU 

Annotation confidence Not enough data

Genome context

AC135504.61: 40585-40716 [-]

Mature mtr-miR5216a

• Accession: MIMAT0021173
• Description: Medicago truncatula mtr-miR5216a mature miRNA
• Sequence: 104 - UUAGGAGUGAAAAACGGUGGAA - 125
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010