Stem-loop mtr-MIR5218

Accession

MI0018282

Description

Medicago truncatula mtr-MIR5218 precursor miRNA

Sequence

augUGAGACUUGGUAGUAAGAUGAUuggagacauuggaagucuugagauagaggucuuuagcaauaaccaa
.((((((((((.....((((((..((.((....)).)).))))))......)))))))..)))........

Structure

-------a   --       -GGUAG      GA  g  g 
        ugU  GAGACUU      UAAGAU  Uu ga a
        |||  |||||||      ||||||  || ||  
        acg  uucugga      guucug  ag uu c
aaccaaua   au       gauaga      -a  g  a 

Annotation confidence Not enough data

Genome context

chr3: 13900537-13900607 [+]

Mature mtr-miR5218

• Accession: MIMAT0021176
• Description: Medicago truncatula mtr-miR5218 mature miRNA
• Sequence: 4 - UGAGACUUGGUAGUAAGAUGAU - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010