Stem-loop mtr-MIR5221

Accession

MI0018284

Description

Medicago truncatula mtr-MIR5221 precursor miRNA

Sequence

uauaaaccaugucauauuaauucaaauaucaucaucugccugcaauuuagcccuugaaucuaaacugaAGGAGAGAUGGUGUUUUGACUUaauaggaaag
...........((.((((((.((((((((((((.(((.(((.((.(((((.........))))).)).))))))))))))).))))).)))))).))...

Structure

uauaaaccaug  a      u     -       a   g   g  a     ccc 
           uc uauuaa ucaaa uaucauc ucu ccu ca uuuag   u
           || |||||| ||||| ||||||| ||| ||| || |||||   u
           ag auaaUU AGUUU GUGGUAG AGA GGA gu aaauc   g
--------gaa  g      C     U       -   -   a  c     uaa 

Annotation confidence Not enough data

Genome context

chr5: 25852862-25852961 [+]

Mature mtr-miR5221

• Accession: MIMAT0021178
• Description: Medicago truncatula mtr-miR5221 mature miRNA
• Sequence: 69 - AGGAGAGAUGGUGUUUUGACUU - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010