Stem-loop mtr-MIR5222

Accession

MI0018285

Description

Medicago truncatula mtr-MIR5222 precursor miRNA

Sequence

gcucaguccaUUACAGGAGAAGAAUGUAUGGCuuuugaugauaaaagcuugacuaauuugucugguagaguucaccauauaaguuuuuccuuuauuaauuuguaua
..............((((((((..(((((((.......(((.....(((.(((......))).))).....))))))))))..))))))))...............

Structure

-gcucaguccaUUAC        AA       Cuuuuga   uaaaa   u   ua 
               AGGAGAAG  UGUAUGG       uga     gcu gac  a
               ||||||||  |||||||       |||     ||| |||   
               uccuuuuu  auauacc       acu     ugg cug  u
auauguuuaauuauu        ga       -------   ugaga   u   uu 

Annotation confidence Not enough data

Genome context

chr6: 10882021-10882126 [+]

Mature mtr-miR5222

• Accession: MIMAT0021179
• Description: Medicago truncatula mtr-miR5222 mature miRNA
• Sequence: 11 - UUACAGGAGAAGAAUGUAUGGC - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010