miRBase entry: mtr-MIR2592at

Stem-loop mtr-MIR2592at


Accession
MI0018297
Description
Medicago truncatula mtr-MIR2592at precursor miRNA

Literature search
1 open access papers mention mtr-MIR2592at
(2 sentences)

Sequence

aauuuuuguuAGGCUGGUUUAGAUGAAGGUAuuaagugucaaggaauggaccucauuucguuggcacuugaauaccaucaucuaaagcaagccuaacaaaaau
.(((((((((((((((.(((((((((.(((((((((((((((((((((.....)))))).)))))))))).))))).))))))))).).))))))))))))))

Structure
a              - G         A     -          -      g 
 auuuuuguuAGGCU G UUUAGAUGA GGUAu uaagugucaa ggaaug a
 |||||||||||||| | ||||||||| ||||| |||||||||| |||||| c
 uaaaaacaauccga c aaaucuacu ccaua guucacgguu cuuuac c
-              a g         a     a          g      u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 36619674-36619776 [-]

Database links

Mature mtr-miR2592at

Accession MIMAT0021191
Description Medicago truncatula mtr-miR2592at mature miRNA
Sequence 11 - AGGCUGGUUUAGAUGAAGGUA - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010