Stem-loop mtr-MIR2670f

Accession

MI0018314

Description

Medicago truncatula mtr-MIR2670f precursor miRNA

Sequence

ugggggaaguAGUGGUCUGUUAGGUUGGGGAaaaagacaucaucccgugagguaaaauuagguuugcuuccuuuuacucccaaaaucuuuuuaccgugggguaaaaagaaucaucauggggguauaaaaggaaccaaauuuaaauuuaacucaaggggucuugaugucguuuuccccaacaugacagaucacuauuuucccca
((((((((((((((((((((((.(((((((((((.(((((((((((.((((.((((.(((((((((.(((((((((((((((...((((((((((....)))))))))).......))))))))..))))))).))))))))).)))).)))).))))...))))))).))))))))))).))))))))))))))))))))))

Structure

                      G           a       ---    g    g    a         c       --        ----aaa          g 
ugggggaaguAGUGGUCUGUUA GUUGGGGAaaa gacauca   uccc ugag uaaa uuagguuug uuccuuu  uacuccca       ucuuuuuacc u
|||||||||||||||||||||| ||||||||||| |||||||   |||| |||| |||| ||||||||| |||||||  ||||||||       ||||||||||  
accccuuuuaucacuagacagu caaccccuuuu cuguagu   gggg acuc auuu aauuuaaac aaggaaa  augggggu       agaaaaaugg g
                      a           g       ucu    a    a    a         c       au        acuacua          g 

Annotation confidence Not enough data

Genome context

AC235487.1: 136435-136637 [-]

Mature mtr-miR2670f

• Accession: MIMAT0021209
• Description: Medicago truncatula mtr-miR2670f mature miRNA
• Sequence: 11 - AGUGGUCUGUUAGGUUGGGGA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010