Stem-loop mtr-MIR2670g

Accession

MI0018315

Description

Medicago truncatula mtr-MIR2670g precursor miRNA

Sequence

uggaggaaguAGUGGUCUGUUAGGUUGGGGAaaaagacaucaucccuugagguaaaauuagguuugcuuccauuuacuuccaaaaucuuuuuaccauggguaaaaagaaucaucauggggguauaaaaggaaccaaauuuaaauuuaacucaaggggucuugaugucguuuuucccaacauaacagaucacuauuuucccca
(((.((((((((((((((((((.(((((((((((.((((((((((((((((.((((.(((((((((.((((...((((((((...((((((((((...)))))))))).......)))))))).....)))).))))))))).)))).)))))))))...))))))).))))))))))).)))))))))))))))))).)))

Structure

   a                  G           a       ---         g    a         c    --auu        ----aaa          a 
ugg ggaaguAGUGGUCUGUUA GUUGGGGAaaa gacauca   ucccuugag uaaa uuagguuug uucc     uacuucca       ucuuuuuacc  
||| |||||||||||||||||| ||||||||||| |||||||   ||||||||| |||| ||||||||| ||||     ||||||||       |||||||||| u
acc cuuuuaucacuagacaau caacccuuuuu cuguagu   ggggaacuc auuu aauuuaaac aagg     augggggu       agaaaaaugg  
   c                  a           g       ucu         a    a         c    aaaau        acuacua          g 

Annotation confidence Not enough data

Genome context

chr5: 7404689-7404890 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR2670g

Mature mtr-miR2670g

• Accession: MIMAT0021210
• Description: Medicago truncatula mtr-miR2670g mature miRNA
• Sequence: 11 - AGUGGUCUGUUAGGUUGGGGA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010