Stem-loop mtr-MIR5235b

Accession

MI0018326

Description

Medicago truncatula mtr-MIR5235b precursor miRNA

Sequence

aaccacuuuaAUAAGGUCAAUGAUUGGCGUGaagcuuuagcucaagcaacuaguuuggcuggaugggacucucguaaauacaugcuugaaucagaacucguggaagacauug
..((((........(((...(((((((((((.....(((((.(((((.....))))))))))(((((...))))).....))))))..)))))..))).)))).........

Structure

-------aa    uuuaAUAA   CAA     --      -------------aagcu     u     a 
         ccac        GGU   UGAUU  GGCGUG                  uuagc caagc a
         ||||        |||   |||||  ||||||                  ||||| ||||| c
         ggug        uca   acuaa  ucguac                  ggucg guuug u
guuacagaa    -------c   -ag     gu      auaaaugcucucagggua     -     a 

Annotation confidence Not enough data

Genome context

Unknown

Mature mtr-miR5235b

• Accession: MIMAT0021221
• Description: Medicago truncatula mtr-miR5235b mature miRNA
• Sequence: 11 - AUAAGGUCAAUGAUUGGCGUG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010