Stem-loop mtr-MIR5236a

Accession

MI0018327

Description

Medicago truncatula mtr-MIR5236a precursor miRNA

Sequence

ggaucauuuugaUGAAUUUCGGGCAGAUUUGGUgggaaauagggggaaaucuugcuguucuugacuuugggcaagcacaggccaaacaugcaguucaacauuuguucaugccucg
.((.((...((.((((((....(((..((((((......(((((.....)))))((((.((((........)))).))))))))))..))))))))).))..)).))........

Structure

-------g  u  uuu  a      UCGG   GA      gggaaauagggggaaaucuug    u    acu 
        ga ca   ug UGAAUU    GCA  UUUGGU                     cugu cuug   u
        || ||   || ||||||    |||  ||||||                     |||| ||||    
        cu gu   ac acuuga    cgu  aaaccg                     gaca gaac   u
gcuccgua  u  -uu  a      ----   ac      ---------------------    c    ggg 

Annotation confidence Not enough data

Genome context

Unknown

Mature mtr-miR5236a

• Accession: MIMAT0021222
• Description: Medicago truncatula mtr-miR5236a mature miRNA
• Sequence: 13 - UGAAUUUCGGGCAGAUUUGGU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010