Stem-loop mtr-MIR5238

Accession

MI0018333

Description

Medicago truncatula mtr-MIR5238 precursor miRNA

Sequence

agauacucgagUGUAGAAAAAACAAAGGGCAAaugauacuuccaguuuucuaugaaguugauccuuuucauguucgacaccaauuaggaa
..........((((.(((.....((((((((......(((((.((....))..))))))).)))))).....))).))))..........

Structure

agauacucga    A   AAAAC      -  Aaugau     -c  u 
          gUGU GAA     AAAGGG CA      acuuc  ag u
          |||| |||     |||||| ||      |||||  ||  
          caca cuu     uuuccu gu      ugaag  uc u
aaggauuaac    g   guacu      a  ------     ua  u 

Annotation confidence Not enough data

Genome context

AC159090.17: 91612-91701 [+]

Mature mtr-miR5238

• Accession: MIMAT0021228
• Description: Medicago truncatula mtr-miR5238 mature miRNA
• Sequence: 12 - UGUAGAAAAAACAAAGGGCAA - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010