Stem-loop mtr-MIR5240

Accession

MI0018339

Description

Medicago truncatula mtr-MIR5240 precursor miRNA

Sequence

aauggcaagaUUGAAAAAAUUGUGGAUUUGAgaauuggaaucgcuuccacaauauuaaucgacucaagcaau
....((..((((((....((((((((..(((.........)))..)))))))).....)))).))..))...

Structure

aaug  aa  -    -AAAA        UU   gaa 
    gc  ga UUGA     AUUGUGGA  UGA   u
    ||  || ||||     ||||||||  |||   u
    cg  cu agcu     uaacaccu  gcu   g
-uaa  aa  c    aauua        uc   aag 

Annotation confidence Not enough data

Genome context

chr1: 12268710-12268781 [-]

Mature mtr-miR5240

• Accession: MIMAT0021234
• Description: Medicago truncatula mtr-miR5240 mature miRNA
• Sequence: 11 - UUGAAAAAAUUGUGGAUUUGA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010