Stem-loop mtr-MIR5247

Accession

MI0018348

Description

Medicago truncatula mtr-MIR5247 precursor miRNA

Sequence

cgcaauuagaGCAGGAGCAAGCAUCUGAUGAcggaaaaaaggguaaaaagauggaaaagaagauggaaaaaaggguaauucuucaauucuaucuguucuguuuuuaguuagaucuguucuuaccaaugcagucuucca
.(((.((.(.(.(((((((.(.((((((((((((((............((((((((..(((((................)))))..)))))))).)))))))....))))))))))))))).))))))).........

Structure

--------c   a  a a C       A C       ----       aaaaggguaaaa        aa     uggaaaa 
         gca uu g G AGGAGCA G AUCUGAU    GAcggaa            agauggaa  gaaga       a
         ||| || | | ||||||| | |||||||    |||||||            ||||||||  |||||        
         cgu aa c c uucuugu c uagauug    uugucuu            ucuaucuu  cuucu       a
accuucuga   -  - - a       - -       auuu       -----------g        aa     uaauggg 

Annotation confidence Not enough data

Genome context

chr4: 936777-936914 [+]

Mature mtr-miR5247

• Accession: MIMAT0021243
• Description: Medicago truncatula mtr-miR5247 mature miRNA
• Sequence: 11 - GCAGGAGCAAGCAUCUGAUGA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010