Stem-loop mtr-MIR5254

Accession

MI0018356

Description

Medicago truncatula mtr-MIR5254 precursor miRNA

Sequence

gauguguagcugaAGGAGGUGGAAGCAUUUGUGAcagaauuguauaagaaaagaauaaucacaaugccuuuccaguuuagcacauucaaguggg
((.((((.(((((....(.((((((((((.((((....(((.(........).)))..)))))))))..))))).)))))))))))).......

Structure

-------  u    a     AGGA G     --     U    caga   g aua 
       ga gugu gcuga    G UGGAA  GCAUU GUGA    auu u   a
       || |||| |||||    | |||||  ||||| ||||    ||| |    
       cu uaca cgauu    u accuu  cguaa cacu    uaa a   g
gggugaa  -    -     ---- g     uc     -    --aa   g aaa 

Annotation confidence Not enough data

Genome context

chr6: 16973918-16974011 [-]

Mature mtr-miR5254

• Accession: MIMAT0021252
• Description: Medicago truncatula mtr-miR5254 mature miRNA
• Sequence: 14 - AGGAGGUGGAAGCAUUUGUGA - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010