Stem-loop mtr-MIR5256

Accession

MI0018358

Description

Medicago truncatula mtr-MIR5256 precursor miRNA

Sequence

caauauccuuauUAAUGGAUUAUGUAAGAUUAAaaugguugaugaagccuugaaucucuucacagaaaugcauugcaaacccaauacaguaucuuacaacacucuuauugauggauucugca
((..((((..(((((((((...((((((((.....((((((.....((..((.((.(((....))).)).))..)).....)))).))..))))))))....)).)))))))))))..))..

Structure

--  au    uu       -  -UUA        UAAaa  -    augaa  cu  a  c   u 
  ca  aucc  auUAAUG GA    UGUAAGAU     ug guug     gc  ug au ucu c
  ||  ||||  ||||||| ||    ||||||||     || ||||     ||  || || |||  
  gu  uagg  uaguuau cu    acauucua     ac uaac     cg  ac ua aga a
ac  cu    --       u  caca        ---ug  a    ccaaa  uu  g  a   c 

Annotation confidence Not enough data

Genome context

chr6: 9574365-9574486 [-]

Mature mtr-miR5256

• Accession: MIMAT0021254
• Description: Medicago truncatula mtr-miR5256 mature miRNA
• Sequence: 13 - UAAUGGAUUAUGUAAGAUUAA - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010