miRBase entry: mtr-MIR5267i

Stem-loop mtr-MIR5267i

Accession

MI0018387

Description

Medicago truncatula mtr-MIR5267i precursor miRNA

Sequence

caaauccuauAGGCAUUUGCUAGAAUACACCCACuuauuuuuuagaaugaguauuuuagcaagugaauaauuaaaaagugguua
.........((..(((((((((((((......((((((((....)))))))))))))))))))))..))...............

Structure

------caaauccua  GG             ACACCC        u 
               uA  CAUUUGCUAGAAU      ACuuauuu u
               ||  |||||||||||||      ||||||||  
               au  gugaacgauuuua      ugaguaag u
auuggugaaaaauua  aa             ------        a

Annotation confidence Not enough data

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Genome context

chr2: 28905565-28905648 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR5267i

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mtr-miR5267i

Accession	MIMAT0021284
Description	Medicago truncatula mtr-miR5267i mature miRNA
Sequence	11 - AGGCAUUUGCUAGAAUACACCCAC - 34
Evidence	experimental Illumina [1]

References

PubMed ID: 21571671
Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
"Devers EA, Branscheid A, May P, Krajinski F"
"Plant Physiol (2011) 156:1990-2010