Stem-loop mtr-MIR5268a

Accession

MI0018394

Description

Medicago truncatula mtr-MIR5268a precursor miRNA

Sequence

uaguauaaaCCAGAGUGGAAUGAAGAUAUGGUUaucagugaggcagugguaugacaacaaagucugaauguuucuggaagccauguugauuaagaaauuucgguuuaagaga
.....((((((.((((....(((.(((((((((.(((..((((((....((.(((......)))))..))))))))).)))))))))..)))....)))).)))))).....

Structure

uagua      A    GGAA   -A         a   gu      gugg  u   aa 
     uaaaCC GAGU    UGA  GAUAUGGUU uca  gaggca    ua gac  c
     |||||| ||||    |||  ||||||||| |||  ||||||    || |||   
     auuugg uuua    auu  uuguaccga ggu  cuuugu    gu cug  a
agaga      c    aaga   ag         a   --      --aa  -   aa 

Annotation confidence Not enough data

Genome context

chr1: 1965868-1965979 [-]

Mature mtr-miR5268a

• Accession: MIMAT0021291
• Description: Medicago truncatula mtr-miR5268a mature miRNA
• Sequence: 10 - CCAGAGUGGAAUGAAGAUAUGGUU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010