Stem-loop mtr-MIR5271a

Accession

MI0018400

Description

Medicago truncatula mtr-MIR5271a precursor miRNA

Sequence

uucgguuCGGAUAAUUGUGGUUACUAACGGUucaguucgguuaaugaauuguuaucaaaauaaugguucgguucaagaauugguuaaaugguucaguuaauucugauacg
..((..(((((((((((.....((((.....(((((((......(((((((((((....)))))))))))......))))))).....)))).))))))..)))))..))

Structure

uu  gu     --      UGGUU    ACGGU       gguuaa           c 
  cg  uCGGA  UAAUUG     ACUA     ucaguuc      ugaauuguuau a
  ||  |||||  ||||||     ||||     |||||||      |||||||||||  
  gc  agucu  auugac     uggu     gguuaag      gcuugguaaua a
--  au     ua      ----u    aaauu       aacuug           a 

Annotation confidence Not enough data

Genome context

chr2: 32033979-32034088 [+]

Mature mtr-miR5271a

• Accession: MIMAT0021297
• Description: Medicago truncatula mtr-miR5271a mature miRNA
• Sequence: 8 - CGGAUAAUUGUGGUUACUAACGGU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010