Stem-loop mtr-MIR5272f

Accession

MI0018410

Description

Medicago truncatula mtr-MIR5272f precursor miRNA

Sequence

aauugauuuugguuaaaagugaguuggauguGAAUUGAUUAUGUUUGGAUACACUuauuuaaaagugguuggauaagccuuuuaauugauuuugaacauuaaaugaccaacuuacccuuuuaauugua
..........(((((((((((((((((((((((((((((((.(((((....(((((......)))))......)))))....))))))))))...)))).......)))))))))..))))))))...

Structure

aauugauuuu        --         -------    ---          ---U     --GAUA     au 
          gguuaaaa  gugaguugg       augu   GAAUUGAUUA    GUUUG      CACUu  u
          ||||||||  |||||||||       ||||   ||||||||||    |||||      |||||   
          uuaauuuu  cauucaacc       uaca   uuuaguuaau    cgaau      gugaa  u
-------aug        cc         aguaaau    agu          uuuc     agguug     aa 

Annotation confidence Not enough data

Genome context

AC159090.17: 101796-101923 [-]

Mature mtr-miR5272f

• Accession: MIMAT0021307
• Description: Medicago truncatula mtr-miR5272f mature miRNA
• Sequence: 32 - GAAUUGAUUAUGUUUGGAUACACU - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010