Stem-loop mtr-MIR5274a

Accession

MI0018414

Description

Medicago truncatula mtr-MIR5274a precursor miRNA

Sequence

guaugCGUUCUACAAUAUGACGGAGUGUAaaugccuauguaucaagcuaugguaagucugauacuuaggcauuuacacuccgucauauugcggaacgcauacc
(((((((((((.(((((((((((((((((((((((((.((((((.(((......))).)))))).))))))))))))))))))))))))).))))))))))).

Structure

-           A                         u      a   au 
 guaugCGUUCU CAAUAUGACGGAGUGUAaaugccua guauca gcu  g
 ||||||||||| ||||||||||||||||||||||||| |||||| |||   
 cauacgcaagg guuauacugccucacauuuacggau cauagu uga  g
c           c                         u      c   au 

Annotation confidence Not enough data

Genome context

chr4: 12634031-12634133 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR5274a

Mature mtr-miR5274a

• Accession: MIMAT0021311
• Description: Medicago truncatula mtr-miR5274a mature miRNA
• Sequence: 6 - CGUUCUACAAUAUGACGGAGUGUA - 29
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010