Stem-loop mtr-MIR5275

Accession

MI0018416

Description

Medicago truncatula mtr-MIR5275 precursor miRNA

Sequence

cccaaaaauccaagcaugugucuccagcuuaaggcucaggaaaaagaauggacagcaucagggcaaguugccccgaugguuuguagacaacuugccccgaugcugacuauuucuuuuccugagccuuuAGCUGGAGUCACAUGCUUGAAUUUuugggagug
(((((((((.((((((((((.((((((((.((((((((((((((.((((((.(((((((.(((((((((((..(((....)))..).)))))))))).))))))).)))))).)))))))))))))).)))))))).)))))))))).)))))))))....

Structure

----         c          u        u              a      a       a          - cc   u 
    cccaaaaau caagcaugug cuccagcu aaggcucaggaaaa gaaugg cagcauc gggcaaguug c  cga g
    ||||||||| |||||||||| |||||||| |||||||||||||| |||||| ||||||| |||||||||| |  |||  
    ggguuUUUA GUUCGUACAC GAGGUCGA uuccgaguccuuuu uuuauc gucguag cccguucaac g  guu g
guga         A          U        u              c      a       c          a au   u 

Annotation confidence Not enough data

Genome context

chr5: 14870220-14870380 [-]

Mature mtr-miR5275

• Accession: MIMAT0021313
• Description: Medicago truncatula mtr-miR5275 mature miRNA
• Sequence: 129 - AGCUGGAGUCACAUGCUUGAAUUU - 152
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010