Stem-loop mtr-MIR5208d

Accession

MI0018418

Description

Medicago truncatula mtr-MIR5208d precursor miRNA

Sequence

gaauauaguCAUAUUAGUCAUAUUUGUAGGCAUaaguauuuugccguuuuaugcuauuaacauggaugaugugaguuuguuca
(((((.(.((((((((.((((.((.((((.((((((...........)))))))))).)).)))).)))))))).).))))).

Structure

-     u g        G    A  U    G      uauu 
 gaaua a uCAUAUUA UCAU UU GUAG CAUaag    u
 ||||| | |||||||| |||| || |||| ||||||    u
 cuugu u aguguagu ggua aa uauc guauuu    g
a     u g        a    c  u    -      ugcc 

Annotation confidence Not enough data

Genome context

chr5: 25584157-25584239 [-]

Mature mtr-miR5208d

• Accession: MIMAT0021315
• Description: Medicago truncatula mtr-miR5208d mature miRNA
• Sequence: 10 - CAUAUUAGUCAUAUUUGUAGGCAU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010