miRBase entry: mtr-MIR5277

Stem-loop mtr-MIR5277


Accession
MI0018419
Description
Medicago truncatula mtr-MIR5277 precursor miRNA


Sequence

ccuugcuugucuuggacuucaagaaacaacuuuguuugacuugcacuucaagguuguuucucgaagugcaagacaagcaAGGUUGUUUCUUGAAGUGCAAGGCaagcaagg
((((((((((((((.(((((((((((((((((((((((.((((((((((.(((.....))).)))))))))).))))))))))))))))))))))).))))))))))))))

Structure
              g                       a          a   u 
ccuugcuugucuug acuucaagaaacaacuuuguuug cuugcacuuc agg u
|||||||||||||| ||||||||||||||||||||||| |||||||||| ||| g
ggaacgaaCGGAAC UGAAGUUCUUUGUUGGAacgaac gaacgugaag ucu u
              G                       a          c   u 


Annotation confidence Not enough data
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Genome context
chr5: 33968902-33969012 [-]

Database links

Mature mtr-miR5277

Accession MIMAT0021316
Description Medicago truncatula mtr-miR5277 mature miRNA
Sequence 80 - AGGUUGUUUCUUGAAGUGCAAGGC - 103
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010