Stem-loop mtr-MIR5282

Accession

MI0018429

Description

Medicago truncatula mtr-MIR5282 precursor miRNA

Sequence

aaaauuagggagggaaauuugugacggaaaacauaaaauuccucacaaauuccuuggucgcaaaauuuuguGACGGAAUUAGAGAGGGAUUUCAUguuuucccucacuaaauuucccucacuaauuu
.(((((((.(((((((((((((((.(((((((((.(((((((((.(.((((((...(((((((....))))))))))))).).))))))))).))))))))).)))).))))))))))).)))))))

Structure

a       g           -    c         a         a a      uug       a 
 aaauuag gagggaaauuu guga ggaaaacau aaauuccuc c aauucc   gucgcaa a
 ||||||| ||||||||||| |||| ||||||||| ||||||||| | ||||||   |||||||  
 uuuaauc cucccuuuaaa cacu ccuuuugUA UUUAGGGAG G UUAAGG   CAGuguu u
-       a           u    c         C         A A      ---       u 

Annotation confidence Not enough data

Genome context

AC145023.4: 4232-4358 [+]

Mature mtr-miR5282

• Accession: MIMAT0021326
• Description: Medicago truncatula mtr-miR5282 mature miRNA
• Sequence: 72 - GACGGAAUUAGAGAGGGAUUUCAU - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010