Stem-loop mtr-MIR2600e

Accession

MI0018434

Description

Medicago truncatula mtr-MIR2600e precursor miRNA

Sequence

gugacauuggccaaucacaaugccacaauguuuguguuucuagaguugggugacauuggccaaucacaaugccacaauguuuguguuucucucucuuucacAAGCAUUGUGGCAUUGUGAUUGGCcaaugucac
((((((((((((((((((((((((((((((((((((.....((((..(((.(((((((((..........))))........))))).))).))))..))))))))))))))))))))))))))))))))))))

Structure

                                    uuucu    uu   u     --------    caau 
gugacauuggccaaucacaaugccacaauguuugug     agag  ggg gacau        uggc    c
||||||||||||||||||||||||||||||||||||     ||||  ||| |||||        ||||     
cacuguaacCGGUUAGUGUUACGGUGUUACGAAcac     ucuc  cuc uugug        accg    a
                                    ---uu    -u   u     uuuguaac    uaac 

Annotation confidence Not enough data

Genome context

chr3: 1808121-1808254 [-]

Mature mtr-miR2600e

• Accession: MIMAT0021331
• Description: Medicago truncatula mtr-miR2600e mature miRNA
• Sequence: 102 - AAGCAUUGUGGCAUUGUGAUUGGC - 125
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010