Stem-loop mtr-MIR5284d

Accession

MI0018441

Description

Medicago truncatula mtr-MIR5284d precursor miRNA

Sequence

ccauguaauuucauauuccuccacuuuuggucccucauuuuacgugccauguaugcagauucugcugacgugguggaauGAGGGACCAAAAGUGGAAGAAUCUgacauuacaggg
((.((((((.(((.((((.((((((((((((((((((((((....(((((((..((((...))))..))))))))))))))))))))))))))))).)))).))).)))))))).

Structure

-  a      u   u    c                      acgu       au    a 
 cc uguaau uca auuc uccacuuuuggucccucauuuu    gccaugu  gcag  
 || |||||| ||| |||| ||||||||||||||||||||||    |||||||  |||| u
 gg acauua agU UAAG AGGUGAAAACCAGGGAGuaagg    uggugca  cguc  
g  -      c   C    A                      ----       gu    u 

Annotation confidence Not enough data

Genome context

chr4: 6702508-6702622 [+]

Mature mtr-miR5284d

• Accession: MIMAT0021338
• Description: Medicago truncatula mtr-miR5284d mature miRNA
• Sequence: 80 - GAGGGACCAAAAGUGGAAGAAUCU - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010