Stem-loop mtr-MIR5285a

Accession

MI0018446

Description

Medicago truncatula mtr-MIR5285a precursor miRNA

Sequence

gagauUGGGACUUUGGGUAGAAUUAGGCGagagacuuauucuuguaacccauugauaucucuuuuguaaaguu
(((((.....(..((((((((((.((........)).)))))....)))))..)..)))))............

Structure

------------     UGGGA UU     ----     U  GCG 
            gagau     C  UGGGU    AGAAU AG   a
            |||||     |  |||||    ||||| ||    
            cucua     g  accca    ucuua uc   g
uugaaauguuuu     ---ua uu     augu     u  aga 

Annotation confidence Not enough data

Genome context

chr1: 27254843-27254915 [-]

Mature mtr-miR5285a

• Accession: MIMAT0021343
• Description: Medicago truncatula mtr-miR5285a mature miRNA
• Sequence: 6 - UGGGACUUUGGGUAGAAUUAGGCG - 29
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010