miRBase entry: mtr-MIR5291b

Stem-loop mtr-MIR5291b

Accession

MI0018458

Description

Medicago truncatula mtr-MIR5291b precursor miRNA

Sequence

gauggaucaaauccaauccauuaacaaauauuuuuGUUUGAUGGAUGGAUUGGAUGGAUuuuauagug
...(((((..((((((((((((..((((((....))))))...)))))))))))).))))).......

Structure

----gau     aa            -aa      u 
       ggauc  auccaauccauu   caaaua u
       |||||  ||||||||||||   ||||||  
       uuUAG  UAGGUUAGGUAG   GUUUGu u
gugauau     -G            GUA      u

Annotation confidence Not enough data

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Genome context

chr5: 13770442-13770509 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR5291b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mtr-miR5291b

Accession	MIMAT0021355
Description	Medicago truncatula mtr-miR5291b mature miRNA
Sequence	36 - GUUUGAUGGAUGGAUUGGAUGGAU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 21571671
Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
"Devers EA, Branscheid A, May P, Krajinski F"
"Plant Physiol (2011) 156:1990-2010