Stem-loop mtr-MIR5294b

Accession

MI0018464

Description

Medicago truncatula mtr-MIR5294b precursor miRNA

Sequence

gagagguccaugcccuuagccguuuaacuauuuaaacgucaucccaucagacgguuaaacuauucugaacugguGCUAAACGGAAUGAGGGUAGUCAUcccucuccu
((((((....((((((((.(((((((((((((((..((((.........))))..))))...........))))..)))))))..))))))))......))))))..

Structure

--      --ucca        -g       --    -----------    aa    auc 
  gagagg      ugcccuua  ccguuua  acua           uuua  cguc   c
  ||||||      ||||||||  |||||||  ||||           ||||  ||||   c
  cucucc      AUGGGAGU  GGCAAAU  uggu           aaau  gcag   a
uc      cUACUG        AA       CG    caagucuuauc    ug    acu 

Annotation confidence Not enough data

Genome context

chr3: 21791743-21791849 [+]

Mature mtr-miR5294b

• Accession: MIMAT0021361
• Description: Medicago truncatula mtr-miR5294b mature miRNA
• Sequence: 75 - GCUAAACGGAAUGAGGGUAGUCAU - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010