Stem-loop mtr-MIR5294c

Accession

MI0018465

Description

Medicago truncatula mtr-MIR5294c precursor miRNA

Sequence

cccaaugagagaucccugcccucagccguuuagcuauuuaaaugucaucccaucagaugguuaaacuauucuaaacauucugguGCUAAACGGAAUGAGGGUAGUCAUccgucucau
....(((((((((..(((((((((.(((((((((.................((((((..(((...........)))..)))))))))))))))..)))))))))..)))..))))))

Structure

ccca      --   cc         -g         uauuuaaaugucauccc      ug   aaac 
    augaga  gau  cugcccuca  ccguuuagc                 aucaga  guu    u
    ||||||  |||  |||||||||  |||||||||                 ||||||  |||    a
    uacucu  cUA  GAUGGGAGU  GGCAAAUCG                 uggucu  caa    u
----      gc   CU         AA         -----------------      ua   aucu 

Annotation confidence Not enough data

Genome context

chr2: 12625026-12625142 [-]

Mature mtr-miR5294c

• Accession: MIMAT0021362
• Description: Medicago truncatula mtr-miR5294c mature miRNA
• Sequence: 85 - GCUAAACGGAAUGAGGGUAGUCAU - 108
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010