Stem-loop mtr-MIR5296

Accession

MI0018470

Description

Medicago truncatula mtr-MIR5296 precursor miRNA

Sequence

cucuugucacuaccucuuaaaaugcaauugacaauauuuggagaaacguguaaauaaaacaauuugcaucucagaAUUUUGUGUGGGUGUAAGAGGUGUauugccauaug
..........(((((((((..((.((....((((.((((.((((....(((((((......))))))))))).)))).)))).)).)).)))))))))............

Structure

--cucuugucac         aa  g  auug    u    g    aacg       aa 
            uaccucuua  au ca    acaa auuu gaga    uguaaau  a
            |||||||||  || ||    |||| |||| ||||    |||||||   
            GUGGAGAAU  UG GU    UGUU UAag cucu    acguuua  a
guauaccguuaU         -G  G  ---G    U    a    ----       ac 

Annotation confidence Not enough data

Genome context

chr3: 41984534-41984643 [-]

Mature mtr-miR5296

• Accession: MIMAT0021367
• Description: Medicago truncatula mtr-miR5296 mature miRNA
• Sequence: 76 - AUUUUGUGUGGGUGUAAGAGGUGU - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010