Stem-loop asu-mir-56

Accession

MI0018549

Description

Ascaris suum asu-mir-56 precursor miRNA

Sequence

uggacggccggguggcagacuaucguggguaugugcauauauauucaUACCCGUAAGUCUCCAUCGAGcuccggcuguc
..(((((((((((((.(((((....((((((((............))))))))..)))))))))......)))))))))

Structure

ug         ------    c     aucg        ugcau 
  gacggccgg      gugg agacu    uggguaug     a
  |||||||||      |||| |||||    ||||||||      
  cugucggcc      UACC UCUGA    GCCCAUac     u
--         ucGAGC    -     --AU        uuaua 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-56

• Accession: MIMAT0021463
• Description: Ascaris suum asu-miR-56 mature miRNA
• Sequence: 48 - UACCCGUAAGUCUCCAUCGAG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477