Stem-loop aca-mir-100

Accession

MI0018711

Description

Anolis carolinensis aca-mir-100 precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

cuuccugcuaguugccacaAACCCGUAGAUCCGAACUUGUGcuucuauguuacacaagcuugugucuauagguaugugucugcuuggccaauuca
......((((((.(.((((.(((.((((((.(((.((((((...........)))))).))).)))))).))).)))).).)).)))).......

Structure

-cuuccu    -  u c    A   C      C   A      cuuc 
       gcua gu g caca ACC GUAGAU CGA CUUGUG    u
       |||| || | |||| ||| |||||| ||| ||||||    a
       cggu cg c gugu ugg uaucug guu gaacac    u
acuuaac    u  u u    a   a      u   c      auug 

Annotation confidence Not enough data

Genome context

CM000943.1: 2624853-2624947 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-mir-100

Mature aca-miR-100

• Accession: MIMAT0021709
• Description: Anolis carolinensis aca-miR-100 mature miRNA
• Sequence: 20 - AACCCGUAGAUCCGAACUUGUG - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107