miRBase entry: aca-mir-10c

Stem-loop aca-mir-10c


Accession
MI0018718
Description
Anolis carolinensis aca-mir-10c precursor miRNA


Sequence

agucguuuauaugUACCCUGUAGAAUCGAAUUUGUGugagcaccucaaucACAAAUUCGUCUCUAGGGGAguauauggacgaugcagag
.((((((..((((((((((.((((..((((((((((((((...))))..))))))))))..)))).))).)))))))))))))......

Structure
-----a      ua       -   G    AU          --    c 
      gucguu  uaugUAC CCU UAGA  CGAAUUUGUG  ugag  
      ||||||  ||||||| ||| ||||  ||||||||||  |||| a
      uagcag  guauaug GGG AUCU  GCUUAAACAc  acuc  
gagacg      --       A   G    CU          ua    c 


Annotation confidence Not enough data
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Genome context
chr2: 71991615-71991703 [-]

Database links

Mature aca-miR-10c-5p

Accession MIMAT0021721
Description Anolis carolinensis aca-miR-10c-5p mature miRNA
Sequence 14 - UACCCUGUAGAAUCGAAUUUGUG - 36
Evidence experimental
Illumina [1]

Mature aca-miR-10c-3p

Accession MIMAT0021722
Description Anolis carolinensis aca-miR-10c-3p mature miRNA
Sequence 51 - ACAAAUUCGUCUCUAGGGGA - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107