Stem-loop aca-mir-124a-1

Accession

MI0018720

Description

Anolis carolinensis aca-mir-124a-1 precursor miRNA

Literature search

1 open access papers mention aca-mir-124a-1
(2 sentences)

Sequence

gcgggaccggaggcgcugccucuccguguucacagcggaccuugauuuaaugucauacaauUAAGGCACGCGGUGAAUGCCAagagcggggcuggaag
......((...(((.((((.(((..((((((((.(((..((((((((...........))))))))..))).))))))))..))))))).)))))...

Structure

gcggga  gga   g    c   cc        a   ga        uaau 
      cc   ggc cugc ucu  guguucac gcg  ccuugauu    g
      ||   ||| |||| |||  |||||||| |||  ||||||||    u
      gg   ucg ggcg aga  CGUAAGUG CGC  GGAAUuaa    c
---gaa  ---   g    -   AC        G   AC        caua 

Annotation confidence Not enough data

Genome context

chr4: 29946081-29946178 [+]

Mature aca-miR-124a

• Accession: MIMAT0021725
• Description: Anolis carolinensis aca-miR-124a mature miRNA
• Sequence: 62 - UAAGGCACGCGGUGAAUGCCA - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107