miRBase entry: aca-mir-99b

Stem-loop aca-mir-99b

Accession

MI0018895

Description

Anolis carolinensis aca-mir-99b precursor miRNA

Sequence

gccauaAACCCGUAGAUCCGAACUUGCGGuacaacugauucacaCAAGCUCGAGUCUGUGGGUAUguguc
..((((.((((((((((.(((.((((.(..............).)))).))).)))))))))).))))..

Structure

gc    A          C   A    C Guacaa 
  caua ACCCGUAGAU CGA CUUG G      c
  |||| |||||||||| ||| |||| |       
  gugU UGGGUGUCUG GCU GAAC c      u
cu    A          A   C    a acuuag

Annotation confidence Not enough data

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Genome context

GL343604.1: 262454-262523 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-mir-99b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature aca-miR-99b-5p

Accession	MIMAT0021998
Description	Anolis carolinensis aca-miR-99b-5p mature miRNA
Sequence	7 - AACCCGUAGAUCCGAACUUGCGG - 29
Evidence	experimental Illumina [1]

Mature aca-miR-99b-3p

Accession	MIMAT0021999
Description	Anolis carolinensis aca-miR-99b-3p mature miRNA
Sequence	45 - CAAGCUCGAGUCUGUGGGUAU - 65
Evidence	experimental Illumina [1]

References

PubMed ID: 21775315
MicroRNAs support a turtle + lizard clade
"Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
"Biol Lett (2012) 8:104-107