Stem-loop aau-MIR160

Accession

MI0018979

Description

Acacia auriculiformis aau-MIR160 precursor miRNA

Literature search

1 open access papers mention aau-MIR160
(4 sentences)

Sequence

agcaugcaugacuccucgcacgccauucgcuaaggccaccacuucacugaugggcuaugcaaaUGGCAUACAGGGAGCCAGGCAcucc
....(((.((.(((((.....((((((.((..((.(((.((......)).))).))..)).)))))).....))))).)).)))....

Structure

agca   a  a     cgcac      c  ua  g   c  cu 
    ugc ug cuccu     gccauu gc  ag cca ca  u
    ||| || |||||     |||||| ||  || ||| ||   
    ACG AC GAGGG     CGGUaa cg  uc ggu gu  c
ccuc   G  C     ACAUA      a  ua  g   a  ca 

Annotation confidence Not enough data

Genome context

Unknown

Mature aau-miR160

• Accession: MIMAT0022672
• Description: Acacia auriculiformis aau-miR160 mature miRNA
• Sequence: 64 - UGGCAUACAGGGAGCCAGGCA - 84
• Evidence: not_experimental

References

1. PubMed ID: 21729267
   Identification of lignin genes and regulatory sequences involved in secondary cell wall formation in Acacia auriculiformis and Acacia mangium via de novo transcriptome sequencing
   Wong MM, Cannon CH, Wickneswari R
   BMC Genomics (2011) 12:342