Accession
MI0019000
Description
Phaeodactylum tricornutum
pti-MIR5482 precursor miRNA
Sequence
gggugacguacgggcgcuggcucguggcagguucggcgugcacuguuaccaacaauagcacgaauuaaauugcgcauugcuauuggguauucaagccacuugacgacauaccgcaaucauucgaaacuagguagucggagcggaaucacgaucacacgaucaccauacccgugcaacguuggccauuccgggucugggcgcagggcggaacgcgugcgacaaacauucaaaauggacguucugcuuuucuuuuuccguugaauuccuacugccuuugugccucggugcuuACAGUAGCGACGACGCCAUUugcuucacua
.((((((((((((((....)))))))(((.((...)).)))..)))))))...........(((.(((((.((((.(((((((((((((((((((...)))))....)))))(((.....((((.((.(((((((.(((((((((....((((....)))).(((.(((((.((.......)).....))))).)))..(.((((((((((((.....................).))))))))))).)...)))))).....))).)))))))..))...)))))))...))))))))).).))).))))).)))....
.((((((((((((((....)))))))(((.((...)).)))..)))))))...........(((.(((((.((((.(((((((((((((((((((...)))))....)))))(((.....((((.((.(((((((.(((((((((....((((....)))).(((.(((((.((.......)).....))))).)))..(.((((((((((((.....................).))))))))))).)...)))))).....))).)))))))..))...)))))))...))))))))).).))).))))).)))....
Structure
gggugacguacgggcgcuggcucguggcagguucggcgugcacuguuaccaacaauagcac u u - a gguauucaagccacuugacgacauacc aucau --a -u c ----- ucacgaucacacgaucaccauacccgugcaacguuggccauuccgggucugggc c - gugcgacaa
gaa uaaau gcg c uugcuauug gca ucga ac agguagu gga gcggaa g agggcggaacg c a
||| ||||| ||| | ||||||||| ||| |||| || ||||||| ||| |||||| | ||||||||||| | c
cuu guUUA CGC G AGCGAUGAC cgu ggcu ug uccguca ccu ugccuu c uuucgucuugc g a
---------------------------------------------------------auca c C A C ------------------------Auu ----- ccg uu u uaagu ---------------------------------------------------uuu u a guaaaacuu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM000612.1: 128204-128523 [+]
Database links
Mature pti-miR5482
| Accession | MIMAT0022115 |
| Description | Phaeodactylum tricornutum pti-miR5482 mature miRNA |
| Sequence | 291 - ACAGUAGCGACGACGCCAUU - 310 |
| Evidence |
experimental
Illumina [1] |
References
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