miRBase entry: rgl-MIR5578

Stem-loop rgl-MIR5578


Accession
MI0019123
Description
Rehmannia glutinosa rgl-MIR5578 precursor miRNA


Sequence


gacaucgugcCAUGUGGCAUGAUGGCAGAAAGUccaucgugccauugugucaucgugccaugugcccaucguguc
(((((.(((.(((((((((((((((((.((.(.(......).).)).)))))))))))))))))..))).)))))

Structure
     c   -c                 G  A U ca 
gacau gug  CAUGUGGCAUGAUGGCA AA G c  u
||||| |||  ||||||||||||||||| || | |   
cugug uac  guguaccgugcuacugu uu c g  c
     c   cc                 g  a c ug 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature rgl-miR5578

Accession MIMAT0023003
Description Rehmannia glutinosa rgl-miR5578 mature miRNA
Sequence 11 - CAUGUGGCAUGAUGGCAGAAAGU - 33
Evidence experimental
Illumina [1]

References

  1. Identification of Novel and Conserved microRNAs in Rehmannia glutinosa L. by Solexa Sequencing
    "Yang Y, Chen X, Chen J, Xu H, Li J, Zhang Z"
    "Plant Mol Bio Rep. (2011) 29:986-996