Stem-loop hvsa-miR-HSUR5

Accession

MI0019125

Description

Herpesvirus saimiri strain A11 hvsa-miR-HSUR5 precursor miRNA

Sequence

UCCGCGCUCUUACUGCUUGAUacuucaacaagaagUUACAGCAGUGAGAGCGCUGCU
...((((((((((((((....(((((.....)))))...))))))))))))))....

Structure

-UCC              UGAU     a 
    GCGCUCUUACUGCU    acuuc a
    ||||||||||||||    ||||| c
    CGCGAGAGUGACGA    Ugaag a
UCGU              -CAU     a 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvsa-miR-HSUR5-5p

• Accession: MIMAT0022682
• Description: Herpesvirus saimiri strain A11 hvsa-miR-HSUR5-5p mature miRNA
• Sequence: 1 - UCCGCGCUCUUACUGCUUGAU - 21
• Evidence: experimental ; Illumina [1]

Mature hvsa-miR-HSUR5-3p

• Accession: MIMAT0022683
• Description: Herpesvirus saimiri strain A11 hvsa-miR-HSUR5-3p mature miRNA
• Sequence: 36 - UUACAGCAGUGAGAGCGCUGCU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21925386
   A primate herpesvirus uses the integrator complex to generate viral microRNAs
   "Cazalla D, Xie M, Steitz JA"
   "Mol Cell (2011) 43:982-992