Stem-loop tur-mir-190

Accession

MI0019389

Description

Tetranychus urticae tur-mir-190 precursor miRNA

Sequence

guaccgcuuuugAGAUAUGUUUGAUAUUCUUGGUUgucaauuuuugcaaaaucaACCAAGAAUCAGACAUAUGCUCAggaucgcuacc
(((.((.((((((((((((((((((..(((((((((................)))))))))))))))))))).))))))).)).))).

Structure

-   c  c       -           AU         ucaauuu 
 gua cg uuuugAG AUAUGUUUGAU  UCUUGGUUg       u
 ||| || ||||||| |||||||||||  |||||||||        
 cau gc aggACUC UAUACAGACUA  AGAACCAac       u
c   c  u       G           --         uaaaacg 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-190-5p

• Accession: MIMAT0023084
• Description: Tetranychus urticae tur-miR-190-5p mature miRNA
• Sequence: 13 - AGAUAUGUUUGAUAUUCUUGGUU - 35
• Evidence: experimental ; Illumina [1]

Mature tur-miR-190-3p

• Accession: MIMAT0023085
• Description: Tetranychus urticae tur-miR-190-3p mature miRNA
• Sequence: 55 - ACCAAGAAUCAGACAUAUGCUCA - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492