Stem-loop vun-MIR319a

Accession

MI0019574

Description

Vigna unguiculata vun-MIR319a precursor miRNA

Gene family

MIPF0000010; MIR159

Literature search

2 open access papers mention vun-MIR319a
(2 sentences)

Sequence

cuuaacaaauguagguaagugagcuuucuucaguccacucauagguggcaguaagauucaauuagcugccgacucauucauccaaaugcugaguagugauacucuuaaagauacucaucaaaugagugaaugaugcgggagacaaauugauucuuaaguuuccuguacUUGGACUGAAGGGAGCUCCCUuuuccuuucuauguaaga
((((.((.....(((.(((.(((((((((((((((((...(((((.(((..(((((.((((((.(((.(((..((((((((.((..((.((((((................)))))).))..)).))))))))..))).)).).)))))).))))).))).)))))...))))))))))))))))).)))..))).....)))))).

Structure

-    a  aaugu   -u   u                 cuc     u   ag     u      a -  g   ac        c  aa  c      gugauac 
 cuua ca     agg  aag gagcuuucuucagucca   auagg ggc  uaaga ucaauu g cu ccg  ucauucau ca  ug ugagua       u
 |||| ||     |||  ||| |||||||||||||||||   ||||| |||  ||||| |||||| | || |||  |||||||| ||  || ||||||        
 gaau gu     ucc  uUC CUCGAGGGAAGUCAGGU   ugucc uug  auucu aguuaa c ga ggc  aguaagug gu  ac acucau       c
a    -  aucuu   uu   C                 Uca     u   -a     u      a a  g   gu        a  aa  u      agaaauu 

Annotation confidence Not enough data

Genome context

Unknown

Mature vun-miR319a

• Accession: MIMAT0022761
• Description: Vigna unguiculata vun-miR319a mature miRNA
• Sequence: 169 - UUGGACUGAAGGGAGCUCCCU - 189
• Evidence: not_experimental

References

1. Identification and validation of conserved microRNAs along with their differential expression in roots of Vigna unguiculata grown under salt stress
   "Paul S, Kundu A, Pal A"
   "Plant Cell Tissue Organ Culture. (2011) 105:233-242